Title | Markov chain Monte Carlo without likelihoods. |
Publication Type | Journal Article |
Year of Publication | 2003 |
Authors | Marjoram, P, Molitor, J, Plagnol, V, Tavare, S |
Journal | Proceedings of the National Academy of Sciences of the United States of America |
Volume | 100 |
Issue | 26 |
Pagination | 15324-8 |
Date Published | 2003 Dec 23 |
Keywords | Stochastic Processes |
Abstract | Many stochastic simulation approaches for generating observations from a posterior distribution depend on knowing a likelihood function. However, for many complex probability models, such likelihoods are either impossible or computationally prohibitive to obtain. Here we present a Markov chain Monte Carlo method for generating observations from a posterior distribution without the use of likelihoods. It can also be used in frequentist applications, in particular for maximum-likelihood estimation. The approach is illustrated by an example of ancestral inference in population genetics. A number of open problems are highlighted in the discussion. |
DOI | 10.1073/pnas.0306899100 |