Publications

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Journal Articles
Christensen BC, Houseman AE, Marsit CJ, Zheng S, Wrensch MR, Wiemels JL, Nelson HH, Karagas MR, Padbury JF, Bueno R et al..  2009.  Aging and environmental exposures alter tissue-specific DNA methylation dependent upon CpG island context.. PLoS genetics. 5(8):e1000602. Abstract
Dodson RE, Houseman AE, Morin B, Levy JI.  2009.  An analysis of continuous black carbon concentrations in proximity to an airport and major roadways. Atmospheric Environment. 43(24):3764-3773. Abstract
Kile ML, Houseman AE, Breton CV, Quamruzzaman Q, Rahman M, Mahiuddin G, Christiani DC.  2007.  Association between total ingested arsenic and toenail arsenic concentrations.. Journal of environmental science and health. Part A, Toxic/hazardous substances & environmental engineering. 42(12):1827-34. Abstract
Christensen BC, Kelsey KT, Zheng S, Houseman AE, Marsit CJ, Wrensch MR, Wiemels JL, Nelson HH, Karagas MR, Kushi LH et al..  2010.  Breast cancer DNA methylation profiles are associated with tumor size and alcohol and folate intake.. PLoS genetics. 6(7):e1001043. Abstract
Houseman AE, Christensen BC, Karagas MR, Wrensch MR, Nelson HH, Wiemels JL, Zheng S, Wiencke JK, Kelsey KT, Marsit CJ.  2009.  Copy number variation has little impact on bead-array-based measures of DNA methylation.. Bioinformatics (Oxford, England). 25(16):1999-2005. Abstract
Kile ML, Houseman AE, Breton CV, Smith T, Quamruzzaman Q, Rahman M, Mahiuddin G, Christiani DC.  2007.  Dietary arsenic exposure in bangladesh.. Environmental health perspectives. 115(6):889-93. Abstract
Zheng S, Houseman AE, Morrison Z, Wrensch MR, Patoka JS, Ramos C, Haas-Kogan DA, McBride S, Marsit CJ, Christensen BC et al..  2011.  DNA hypermethylation profiles associated with glioma subtypes and EZH2 and IGFBP2 mRNA expression.. Neuro-oncology. 13(3):280-9. Abstract
Marsit CJ, Koestler DC, Christensen BC, Karagas MR, Houseman AE, Kelsey KT.  2011.  DNA methylation array analysis identifies profiles of blood-derived DNA methylation associated with bladder cancer.. Journal of clinical oncology : official journal of the American Society of Clinical Oncology. 29(9):1133-9. Abstract
Houseman AE, Accomando WP, Koestler DC, Christensen BC, Marsit CJ, Nelson HH, Wiencke JK, Kelsey KT.  2012.  DNA methylation arrays as surrogate measures of cell mixture distribution.. BMC bioinformatics. 13(1):86. Abstract
Christensen BC, Smith AA, Zheng S, Koestler DC, Houseman AE, Marsit CJ, Wiemels JL, Nelson HH, Karagas MR, Wrensch MR et al..  2011.  DNA methylation, isocitrate dehydrogenase mutation, and survival in glioma.. Journal of the National Cancer Institute. 103(2):143-53. Abstract
Houseman AE, Coull BA, Betensky RA.  2006.  Feature-specific penalized latent class analysis for genomic data.. Biometrics. 62(4):1062-70. Abstract
Breton CV, Houseman AE, Kile ML, Quamruzzaman Q, Rahman M, Mahiuddin G, Christiani DC.  2006.  Gender-specific protective effect of hemoglobin on arsenic-induced skin lesions.. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology. 15(5):902-7. Abstract
Poage GM, Houseman AE, Christensen BC, Butler RA, Avissar-Whiting M, McClean MD, Waterboer T, Pawlita M, Marsit CJ, Kelsey KT.  2011.  Global hypomethylation identifies Loci targeted for hypermethylation in head and neck cancer.. Clinical cancer research : an official journal of the American Association for Cancer Research. 17(11):3579-89. Abstract
Poage GM, Butler RA, Houseman AE, McClean MD, Nelson HH, Christensen BC, Marsit CJ, Kelsey KT.  2012.  Identification of an Epigenetic Profile Classifier That Is Associated with Survival in Head and Neck Cancer.. Cancer research. 72(11):2728-2737. Abstract
Marsit CJ, Houseman AE, Christensen BC, Gagne L, Wrensch MR, Nelson HH, Wiemels J, Zheng S, Wiencke JK, Andrew AS et al..  2010.  Identification of methylated genes associated with aggressive bladder cancer.. PloS one. 5(8):e12334. Abstract
Wilhelm-Benartzi CS, Houseman AE, Maccani MA, Poage GM, Koestler DC, Langevin SM, Gagne LA, Banister CE, Padbury JF, Marsit CJ.  2012.  In utero exposures, infant growth, and DNA methylation of repetitive elements and developmentally related genes in human placenta.. Environmental health perspectives. 120(2):296-302. Abstract
Langevin SM, Houseman AE, Christensen BC, Wiencke JK, Nelson HH, Karagas MR, Marsit CJ, Kelsey KT.  2011.  The influence of aging, environmental exposures and local sequence features on the variation of DNA methylation in blood.. Epigenetics : official journal of the DNA Methylation Society. 6(7):908-19. Abstract
Nelson HH, Marsit CJ, Christensen BC, Houseman AE, Kontic M, Wiemels JL, Karagas MR, Wrensch MR, Zheng S, Wiencke JK et al..  2012.  Key epigenetic changes associated with lung cancer development: Results from dense methylation array profiling.. Epigenetics : official journal of the DNA Methylation Society. 7(6):559-66. Abstract
DeSantis SM, Houseman AE, Coull BA, Louis DN, Mohapatra G, Betensky RA.  2009.  A latent class model with hidden Markov dependence for array CGH data.. Biometrics. 65(4):1296-305. Abstract
Houseman AE, Christensen BC, Yeh R-F, Marsit CJ, Karagas MR, Wrensch M, Nelson HH, Wiemels J, Zheng S, Wiencke JK et al..  2008.  Model-based clustering of DNA methylation array data: a recursive-partitioning algorithm for high-dimensional data arising as a mixture of beta distributions.. BMC bioinformatics. 9:365. Abstract
Houseman AE, Marsit C, Karagas M, Ryan LM.  2007.  Penalized item response theory models: application to epigenetic alterations in bladder cancer.. Biometrics. 63(4):1269-77. Abstract
Langevin SM, Koestler DC, Christensen BC, Butler RA, Wiencke JK, Nelson HH, Houseman AE, Marsit CJ, Kelsey KT.  2012.  Peripheral blood DNA methylation profiles are indicative of head and neck squamous cell carcinoma: an epigenome-wide association study.. Epigenetics : official journal of the DNA Methylation Society. 7(3):291-9. Abstract
Koestler DC, Marsit CJ, Christensen BC, Accomando WP, Langevin SM, Houseman AE, Nelson HH, Karagas MR, Wiencke JK, Kelsey KT.  2012.  Peripheral blood immune cell methylation profiles are associated with non-hematopoietic cancers.. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology. Abstract
Sánchez BN, Houseman AE, Ryan LM.  2009.  Residual-based diagnostics for structural equation models.. Biometrics. 65(1):104-15. Abstract
Koestler DC, Marsit CJ, Christensen BC, Karagas MR, Bueno R, Sugarbaker DJ, Kelsey KT, Houseman AE.  2010.  Semi-supervised recursively partitioned mixture models for identifying cancer subtypes.. Bioinformatics (Oxford, England). 26(20):2578-85. Abstract